Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 TNK2-216ENST00000468819 876 ntTSL 1 (best)26.69■■□□□ 1.861e-6■□□□□ 8.8
HNRNPUQ00839 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.851e-6■□□□□ 8.8
HNRNPUQ00839 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.491e-6■□□□□ 8.8
HNRNPUQ00839 RBP4-203ENST00000371469 814 ntTSL 5 BASIC16.45■□□□□ 0.221e-6■□□□□ 8.8
HNRNPUQ00839 RBP4-204ENST00000629763 838 ntTSL 5 BASIC13.16□□□□□ -0.31e-6■□□□□ 8.8
HNRNPUQ00839 FDXR-208ENST00000578473 2482 ntTSL 1 (best)29.45■■■□□ 2.34e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.074e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC27.35■■□□□ 1.974e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC27.19■■□□□ 1.944e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-206ENST00000577509 1912 ntTSL 227.09■■□□□ 1.934e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-218ENST00000583881 1561 ntTSL 226.5■■□□□ 1.834e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-209ENST00000579482 2157 ntTSL 226.35■■□□□ 1.814e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC26.05■■□□□ 1.764e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-212ENST00000580492 553 ntTSL 525.43■■□□□ 1.664e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.634e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-207ENST00000577932 572 ntTSL 225.1■■□□□ 1.614e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC25.02■■□□□ 1.64e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC24.77■■□□□ 1.564e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-216ENST00000582710 846 ntTSL 524.17■■□□□ 1.464e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-210ENST00000579543 558 ntTSL 422.1■■□□□ 1.134e-8■□□□□ 8.7
HNRNPUQ00839 FDXR-213ENST00000581219 567 ntTSL 421.39■■□□□ 1.014e-8■□□□□ 8.7
HNRNPUQ00839 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.261e-9■□□□□ 8.7
HNRNPUQ00839 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.997e-7■□□□□ 8.7
HNRNPUQ00839 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.157e-7■□□□□ 8.7
HNRNPUQ00839 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.147e-7■□□□□ 8.7
HNRNPUQ00839 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC15.92■□□□□ 0.147e-7■□□□□ 8.7
HNRNPUQ00839 SERPINA3-208ENST00000556968 1289 ntTSL 1 (best)13.75□□□□□ -0.217e-7■□□□□ 8.7
HNRNPUQ00839 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.447e-7■□□□□ 8.7
HNRNPUQ00839 SERPINA3-207ENST00000556388 480 ntTSL 410.62□□□□□ -0.717e-7■□□□□ 8.7
HNRNPUQ00839 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.773e-8■□□□□ 8.6
HNRNPUQ00839 A2M-212ENST00000545828 471 ntTSL 47.62□□□□□ -1.193e-8■□□□□ 8.6
HNRNPUQ00839 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)25.86■■□□□ 1.734e-9■□□□□ 8.6
HNRNPUQ00839 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.642e-8■□□□□ 8.5
HNRNPUQ00839 GNPTG-205ENST00000527168 1317 ntTSL 529.76■■■□□ 2.362e-8■□□□□ 8.5
HNRNPUQ00839 GNPTG-207ENST00000529110 552 ntTSL 227.32■■□□□ 1.962e-8■□□□□ 8.5
HNRNPUQ00839 GNPTG-208ENST00000529957 922 ntTSL 527.11■■□□□ 1.932e-8■□□□□ 8.5
HNRNPUQ00839 GNPTG-209ENST00000534197 420 ntTSL 327.11■■□□□ 1.932e-8■□□□□ 8.5
HNRNPUQ00839 GNPTG-206ENST00000527876 550 ntTSL 426.73■■□□□ 1.872e-8■□□□□ 8.5
HNRNPUQ00839 GNPTG-202ENST00000526820 572 ntTSL 324.1■■□□□ 1.452e-8■□□□□ 8.5
HNRNPUQ00839 WDR45B-203ENST00000571817 889 ntTSL 325.56■■□□□ 1.687e-7■□□□□ 8.5
HNRNPUQ00839 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.237e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-208ENST00000588297 580 ntTSL 320.55■□□□□ 0.887e-7■□□□□ 8.5
HNRNPUQ00839 WDR45B-205ENST00000572583 2322 ntTSL 1 (best)20.08■□□□□ 0.87e-7■□□□□ 8.5
HNRNPUQ00839 WDR45B-208ENST00000574828 765 ntTSL 319.78■□□□□ 0.767e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.497e-7■□□□□ 8.5
HNRNPUQ00839 WDR45B-206ENST00000573616 896 ntTSL 517.29■□□□□ 0.367e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.357e-7■□□□□ 8.5
HNRNPUQ00839 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.277e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC16.39■□□□□ 0.217e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-210ENST00000589389 3606 ntTSL 1 (best)15.8■□□□□ 0.127e-7■□□□□ 8.5
HNRNPUQ00839 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.17e-7■□□□□ 8.5
HNRNPUQ00839 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.027e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-209ENST00000588732 3527 ntTSL 1 (best)13.87□□□□□ -0.197e-7■□□□□ 8.5
HNRNPUQ00839 WDR45B-204ENST00000571835 869 ntTSL 511.26□□□□□ -0.617e-7■□□□□ 8.5
HNRNPUQ00839 GLYR1-203ENST00000586095 319 ntTSL 25.01□□□□□ -1.617e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC22.07■■□□□ 1.128e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-209ENST00000493157 816 ntTSL 521.31■■□□□ 18e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.918e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.588e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-207ENST00000490012 793 ntTSL 318.27■□□□□ 0.528e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.158e-7■□□□□ 8.5
HNRNPUQ00839 CCNY-208ENST00000492478 809 ntTSL 511.87□□□□□ -0.518e-7■□□□□ 8.5
HNRNPUQ00839 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.642e-6■□□□□ 8.5
HNRNPUQ00839 GALNT2-205ENST00000494106 692 ntTSL 517.3■□□□□ 0.362e-6■□□□□ 8.5
HNRNPUQ00839 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.292e-6■□□□□ 8.5
HNRNPUQ00839 RNASET2-212ENST00000510083 2280 ntTSL 222.01■■□□□ 1.114e-9■□□□□ 8.5
HNRNPUQ00839 RNASET2-205ENST00000467705 524 ntTSL 513.33□□□□□ -0.284e-9■□□□□ 8.5
HNRNPUQ00839 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.263e-6■□□□□ 8.5
HNRNPUQ00839 PTPRG-205ENST00000475527 2694 ntTSL 528.12■■■□□ 2.093e-6■□□□□ 8.5
HNRNPUQ00839 PTPRG-207ENST00000495879 3011 ntTSL 1 (best)26.22■■□□□ 1.793e-6■□□□□ 8.5
HNRNPUQ00839 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC25.45■■□□□ 1.673e-6■□□□□ 8.5
HNRNPUQ00839 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.71■□□□□ 0.753e-6■□□□□ 8.5
HNRNPUQ00839 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC12.43□□□□□ -0.421e-323■□□□□ 8.4
HNRNPUQ00839 MALAT1-202ENST00000534336 8708 ntBASIC12.02□□□□□ -0.491e-323■□□□□ 8.4
HNRNPUQ00839 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC10.61□□□□□ -0.711e-323■□□□□ 8.4
HNRNPUQ00839 BCL2L1-208ENST00000450273 894 ntTSL 322.41■■□□□ 1.181e-6■□□□□ 8.4
HNRNPUQ00839 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.61e-6■□□□□ 8.4
HNRNPUQ00839 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.561e-6■□□□□ 8.4
HNRNPUQ00839 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC18.4■□□□□ 0.541e-6■□□□□ 8.4
HNRNPUQ00839 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC19.13■□□□□ 0.657e-9■□□□□ 8.4
HNRNPUQ00839 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC15.36■□□□□ 0.057e-9■□□□□ 8.4
HNRNPUQ00839 AC004687.1-201ENST00000579003 1625 ntBASIC29.34■■■□□ 2.292e-42■□□□□ 8.4
HNRNPUQ00839 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.22■□□□□ 0.831e-22■□□□□ 8.3
HNRNPUQ00839 SNHG22-202ENST00000615535 421 nt17.65■□□□□ 0.421e-22■□□□□ 8.3
HNRNPUQ00839 SCARNA17-201ENST00000516183 144 ntBASIC-0.46□□□□□ -2.481e-22■□□□□ 8.3
HNRNPUQ00839 C1GALT1-203ENST00000419721 591 ntTSL 326.76■■□□□ 1.871e-7■□□□□ 8.3
HNRNPUQ00839 C1GALT1-206ENST00000467716 458 ntTSL 522.43■■□□□ 1.181e-7■□□□□ 8.3
HNRNPUQ00839 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.381e-7■□□□□ 8.3
HNRNPUQ00839 C1GALT1-204ENST00000429911 802 ntTSL 515.59■□□□□ 0.091e-7■□□□□ 8.3
HNRNPUQ00839 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)15.09■□□□□ 0.011e-7■□□□□ 8.3
HNRNPUQ00839 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.975e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-208ENST00000521672 597 ntTSL 510.61□□□□□ -0.715e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.865e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.55□□□□□ -1.25e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-205ENST00000518587 670 ntTSL 27.49□□□□□ -1.215e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.49□□□□□ -1.215e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-211ENST00000523622 247 ntTSL 36.86□□□□□ -1.315e-6■□□□□ 8.3
HNRNPUQ00839 NPM1-210ENST00000523339 268 ntTSL 24.57□□□□□ -1.685e-6■□□□□ 8.3
HNRNPUQ00839 PLXNB1-209ENST00000466353 626 ntTSL 323.54■■□□□ 1.367e-11■□□□□ 8.3
HNRNPUQ00839 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.917e-11■□□□□ 8.3
Retrieved 100 of 2,288 protein–RNA pairs in 47.1 ms