RNA–Protein interactions for RNA: ENST00000508832.2

MALAT1-201, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 1,519 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-201ENST00000508832 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
MALAT1-201ENST00000508832 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
MALAT1-201ENST00000508832 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
MALAT1-201ENST00000508832 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
MALAT1-201ENST00000508832 FOXD1Q16676 465 aa21.68■■□□□ 1.06
MALAT1-201ENST00000508832 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
MALAT1-201ENST00000508832 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.9
MALAT1-201ENST00000508832 ADRA2BP18089 450 aa20.61■□□□□ 0.89
MALAT1-201ENST00000508832 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
MALAT1-201ENST00000508832 MSH5O43196 834 aa20.12■□□□□ 0.81
MALAT1-201ENST00000508832 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
MALAT1-201ENST00000508832 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
MALAT1-201ENST00000508832 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
MALAT1-201ENST00000508832 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
MALAT1-201ENST00000508832 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
MALAT1-201ENST00000508832 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
MALAT1-201ENST00000508832 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
MALAT1-201ENST00000508832 KCNA4P22459 653 aa18.11■□□□□ 0.49
MALAT1-201ENST00000508832 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
MALAT1-201ENST00000508832 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
MALAT1-201ENST00000508832 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.48
MALAT1-201ENST00000508832 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.47
MALAT1-201ENST00000508832 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.43
MALAT1-201ENST00000508832 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
MALAT1-201ENST00000508832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.35
MALAT1-201ENST00000508832 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
MALAT1-201ENST00000508832 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.34
MALAT1-201ENST00000508832 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
MALAT1-201ENST00000508832 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
MALAT1-201ENST00000508832 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
MALAT1-201ENST00000508832 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
MALAT1-201ENST00000508832 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
MALAT1-201ENST00000508832 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
MALAT1-201ENST00000508832 ZBTB22O15209 634 aa16.66■□□□□ 0.26
MALAT1-201ENST00000508832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
MALAT1-201ENST00000508832 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
MALAT1-201ENST00000508832 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
MALAT1-201ENST00000508832 APLP2Q06481 763 aa16.55■□□□□ 0.24
MALAT1-201ENST00000508832 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
MALAT1-201ENST00000508832 CAPN15O75808 1086 aa16.48■□□□□ 0.23
MALAT1-201ENST00000508832 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
MALAT1-201ENST00000508832 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
MALAT1-201ENST00000508832 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
MALAT1-201ENST00000508832 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
MALAT1-201ENST00000508832 DSG3P32926 999 aa16.27■□□□□ 0.2
MALAT1-201ENST00000508832 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
MALAT1-201ENST00000508832 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
MALAT1-201ENST00000508832 ABCB7O75027 752 aa16.13■□□□□ 0.17
MALAT1-201ENST00000508832 POLA2Q14181 598 aa16.02■□□□□ 0.15
MALAT1-201ENST00000508832 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.11
MALAT1-201ENST00000508832 FBLN2P98095 1184 aa15.58■□□□□ 0.08
MALAT1-201ENST00000508832 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
MALAT1-201ENST00000508832 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
MALAT1-201ENST00000508832 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
MALAT1-201ENST00000508832 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
MALAT1-201ENST00000508832 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
MALAT1-201ENST00000508832 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
MALAT1-201ENST00000508832 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
MALAT1-201ENST00000508832 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
MALAT1-201ENST00000508832 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
MALAT1-201ENST00000508832 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
MALAT1-201ENST00000508832 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
MALAT1-201ENST00000508832 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
MALAT1-201ENST00000508832 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
MALAT1-201ENST00000508832 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
MALAT1-201ENST00000508832 HRCP23327 699 aa15.03■□□□□ -0
MALAT1-201ENST00000508832 DCAF1Q9Y4B6 1507 aa15.02■□□□□ -0
MALAT1-201ENST00000508832 SUPT5HO00267 1087 aaKnown RBP15.02□□□□□ -0.01
MALAT1-201ENST00000508832 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
MALAT1-201ENST00000508832 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
MALAT1-201ENST00000508832 PITPNM1O00562 1244 aa14.96□□□□□ -0.02
MALAT1-201ENST00000508832 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
MALAT1-201ENST00000508832 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
MALAT1-201ENST00000508832 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
MALAT1-201ENST00000508832 POTEHQ6S545 545 aa14.8□□□□□ -0.04
MALAT1-201ENST00000508832 FKBP8Q14318 412 aa14.79□□□□□ -0.04
MALAT1-201ENST00000508832 PROM2Q8N271 834 aa14.78□□□□□ -0.04
MALAT1-201ENST00000508832 FXR2P51116 673 aaKnown RBP eCLIP14.73□□□□□ -0.05
MALAT1-201ENST00000508832 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
MALAT1-201ENST00000508832 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
MALAT1-201ENST00000508832 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
MALAT1-201ENST00000508832 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
MALAT1-201ENST00000508832 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
MALAT1-201ENST00000508832 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
MALAT1-201ENST00000508832 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
MALAT1-201ENST00000508832 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
MALAT1-201ENST00000508832 ABCC9O60706 1549 aa14.48□□□□□ -0.09
MALAT1-201ENST00000508832 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
MALAT1-201ENST00000508832 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
MALAT1-201ENST00000508832 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
MALAT1-201ENST00000508832 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
MALAT1-201ENST00000508832 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
MALAT1-201ENST00000508832 HAX1O00165 279 aa14.31□□□□□ -0.12
MALAT1-201ENST00000508832 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
MALAT1-201ENST00000508832 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
MALAT1-201ENST00000508832 PPARGC1BQ86YN6 1023 aaKnown RBP14.3□□□□□ -0.12
MALAT1-201ENST00000508832 RSF1Q96T23 1441 aaPredicted RBP14.3□□□□□ -0.12
MALAT1-201ENST00000508832 MIER1Q8N108 512 aa14.28□□□□□ -0.12
MALAT1-201ENST00000508832 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
MALAT1-201ENST00000508832 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms