Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL031432.3-201ENST00000607698 485 ntBASIC22.33■■□□□ 1.17
GABREP78334 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
GABREP78334 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
GABREP78334 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
GABREP78334 SRD5A1P1-201ENST00000442297 786 ntBASIC22.32■■□□□ 1.16
GABREP78334 SUDS3P1-201ENST00000505831 966 ntBASIC22.32■■□□□ 1.16
GABREP78334 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
GABREP78334 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GABREP78334 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GABREP78334 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GABREP78334 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
GABREP78334 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GABREP78334 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.31■■□□□ 1.16
GABREP78334 MIR5787-201ENST00000611784 55 ntBASIC22.31■■□□□ 1.16
GABREP78334 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GABREP78334 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.3■■□□□ 1.16
GABREP78334 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GABREP78334 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.3■■□□□ 1.16
GABREP78334 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.3■■□□□ 1.16
GABREP78334 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
GABREP78334 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
GABREP78334 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GABREP78334 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.3■■□□□ 1.16
GABREP78334 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GABREP78334 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
GABREP78334 EDA-201ENST00000338901 1233 ntBASIC22.29■■□□□ 1.16
GABREP78334 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GABREP78334 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
GABREP78334 AC104564.3-201ENST00000582367 638 ntBASIC22.29■■□□□ 1.16
GABREP78334 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.29■■□□□ 1.16
GABREP78334 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GABREP78334 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.28■■□□□ 1.16
GABREP78334 AC024257.2-201ENST00000549699 147 ntBASIC22.28■■□□□ 1.16
GABREP78334 AL355001.2-201ENST00000620617 1191 ntBASIC22.28■■□□□ 1.16
GABREP78334 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GABREP78334 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
GABREP78334 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.28■■□□□ 1.16
GABREP78334 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
GABREP78334 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GABREP78334 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GABREP78334 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
GABREP78334 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GABREP78334 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
GABREP78334 AC090877.2-201ENST00000558441 1738 ntBASIC22.26■■□□□ 1.15
GABREP78334 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
GABREP78334 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
GABREP78334 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
GABREP78334 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.25■■□□□ 1.15
GABREP78334 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.25■■□□□ 1.15
GABREP78334 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GABREP78334 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
GABREP78334 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 AC105265.2-201ENST00000467189 838 ntBASIC22.24■■□□□ 1.15
GABREP78334 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.24■■□□□ 1.15
GABREP78334 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.24■■□□□ 1.15
GABREP78334 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
GABREP78334 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GABREP78334 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
GABREP78334 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GABREP78334 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GABREP78334 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GABREP78334 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GABREP78334 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GABREP78334 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GABREP78334 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GABREP78334 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GABREP78334 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
GABREP78334 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.22■■□□□ 1.15
GABREP78334 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
GABREP78334 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GABREP78334 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.22■■□□□ 1.15
GABREP78334 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GABREP78334 AL121749.1-202ENST00000609313 2153 ntBASIC22.21■■□□□ 1.15
GABREP78334 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
GABREP78334 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GABREP78334 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.21■■□□□ 1.15
GABREP78334 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
GABREP78334 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GABREP78334 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
GABREP78334 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GABREP78334 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
GABREP78334 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GABREP78334 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.2■■□□□ 1.14
GABREP78334 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.2■■□□□ 1.14
GABREP78334 AF213884.3-201ENST00000563833 479 ntBASIC22.2■■□□□ 1.14
GABREP78334 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
GABREP78334 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.2■■□□□ 1.14
GABREP78334 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
GABREP78334 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms