Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PER3P56645 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PER3P56645 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PER3P56645 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PER3P56645 AL136116.3-201ENST00000402907 1138 ntBASIC21.43■■□□□ 1.02
PER3P56645 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PER3P56645 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PER3P56645 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.43■■□□□ 1.02
PER3P56645 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.43■■□□□ 1.02
PER3P56645 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PER3P56645 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PER3P56645 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PER3P56645 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.42■■□□□ 1.02
PER3P56645 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.42■■□□□ 1.02
PER3P56645 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.42■■□□□ 1.02
PER3P56645 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PER3P56645 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.42■■□□□ 1.02
PER3P56645 AC131281.2-201ENST00000520478 145 ntBASIC21.42■■□□□ 1.02
PER3P56645 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.42■■□□□ 1.02
PER3P56645 AC092028.1-203ENST00000608262 953 ntBASIC21.42■■□□□ 1.02
PER3P56645 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PER3P56645 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PER3P56645 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PER3P56645 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PER3P56645 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.41■■□□□ 1.02
PER3P56645 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PER3P56645 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PER3P56645 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.41■■□□□ 1.02
PER3P56645 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.41■■□□□ 1.02
PER3P56645 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PER3P56645 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PER3P56645 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PER3P56645 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PER3P56645 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PER3P56645 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PER3P56645 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 AC120024.1-201ENST00000562672 995 ntBASIC21.39■■□□□ 1.01
PER3P56645 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PER3P56645 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PER3P56645 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.38■■□□□ 1.01
PER3P56645 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PER3P56645 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.38■■□□□ 1.01
PER3P56645 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PER3P56645 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PER3P56645 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PER3P56645 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PER3P56645 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PER3P56645 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PER3P56645 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.37■■□□□ 1.01
PER3P56645 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PER3P56645 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.37■■□□□ 1.01
PER3P56645 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.37■■□□□ 1.01
PER3P56645 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PER3P56645 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PER3P56645 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PER3P56645 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.37■■□□□ 1.01
PER3P56645 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PER3P56645 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PER3P56645 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PER3P56645 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PER3P56645 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PER3P56645 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.35■■□□□ 1.01
PER3P56645 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.35■■□□□ 1.01
PER3P56645 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PER3P56645 AL356740.2-201ENST00000601559 647 ntBASIC21.35■■□□□ 1.01
PER3P56645 AC010997.5-201ENST00000609182 354 ntBASIC21.35■■□□□ 1.01
PER3P56645 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PER3P56645 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PER3P56645 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PER3P56645 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PER3P56645 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.34■■□□□ 1.01
PER3P56645 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PER3P56645 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PER3P56645 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.34■■□□□ 1.01
PER3P56645 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.34■■□□□ 1.01
PER3P56645 MTDHP2-201ENST00000601468 714 ntBASIC21.34■■□□□ 1.01
PER3P56645 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PER3P56645 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PER3P56645 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PER3P56645 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PER3P56645 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.33■■□□□ 1.01
PER3P56645 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PER3P56645 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PER3P56645 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PER3P56645 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
PER3P56645 MIR6724-1-201ENST00000616420 92 ntBASIC21.33■■□□□ 1.01
PER3P56645 MIR6724-2-201ENST00000616483 92 ntBASIC21.33■■□□□ 1.01
PER3P56645 MIR6724-4-201ENST00000617390 92 ntBASIC21.33■■□□□ 1.01
PER3P56645 MIR6724-3-201ENST00000622482 92 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms