Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.64■□□□□ 0.73
LMO1P25800 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO1P25800 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
LMO1P25800 ABHD17AP5-201ENST00000580133 923 ntBASIC19.64■□□□□ 0.73
LMO1P25800 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO1P25800 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMO1P25800 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO1P25800 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMO1P25800 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO1P25800 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LMO1P25800 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO1P25800 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.63■□□□□ 0.73
LMO1P25800 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMO1P25800 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMO1P25800 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.63■□□□□ 0.73
LMO1P25800 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMO1P25800 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO1P25800 AC141586.4-201ENST00000624558 1573 ntBASIC19.62■□□□□ 0.73
LMO1P25800 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMO1P25800 LINC01124-201ENST00000409786 2117 ntBASIC19.62■□□□□ 0.73
LMO1P25800 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.62■□□□□ 0.73
LMO1P25800 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMO1P25800 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.62■□□□□ 0.73
LMO1P25800 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
LMO1P25800 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LMO1P25800 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.61■□□□□ 0.73
LMO1P25800 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LMO1P25800 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
LMO1P25800 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO1P25800 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.6■□□□□ 0.73
LMO1P25800 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMO1P25800 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.6■□□□□ 0.73
LMO1P25800 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO1P25800 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO1P25800 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMO1P25800 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO1P25800 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LMO1P25800 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.59■□□□□ 0.73
LMO1P25800 NTF6A-201ENST00000591175 560 ntBASIC19.59■□□□□ 0.73
LMO1P25800 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LMO1P25800 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMO1P25800 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
LMO1P25800 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
LMO1P25800 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO1P25800 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LMO1P25800 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LMO1P25800 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO1P25800 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LMO1P25800 LONRF2P2-201ENST00000439212 571 ntBASIC19.58■□□□□ 0.72
LMO1P25800 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.58■□□□□ 0.72
LMO1P25800 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO1P25800 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO1P25800 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.58■□□□□ 0.72
LMO1P25800 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMO1P25800 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMO1P25800 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.58■□□□□ 0.72
LMO1P25800 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO1P25800 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO1P25800 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LMO1P25800 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 AL592295.1-201ENST00000400984 884 ntBASIC19.57■□□□□ 0.72
LMO1P25800 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.57■□□□□ 0.72
LMO1P25800 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO1P25800 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.56■□□□□ 0.72
LMO1P25800 AC068473.5-201ENST00000616428 2072 ntBASIC19.56■□□□□ 0.72
LMO1P25800 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO1P25800 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO1P25800 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LMO1P25800 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LMO1P25800 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO1P25800 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO1P25800 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO1P25800 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LMO1P25800 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.55■□□□□ 0.72
LMO1P25800 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LMO1P25800 AC079834.2-201ENST00000609776 1949 ntBASIC19.55■□□□□ 0.72
LMO1P25800 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO1P25800 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LMO1P25800 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
LMO1P25800 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO1P25800 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LMO1P25800 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.55■□□□□ 0.72
LMO1P25800 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.55■□□□□ 0.72
LMO1P25800 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.54■□□□□ 0.72
LMO1P25800 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.54■□□□□ 0.72
LMO1P25800 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms