Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPB1P04440 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.87■□□□□ 0.93
HLA-DPB1P04440 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HLA-DPB1P04440 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPB1P04440 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.86■□□□□ 0.93
HLA-DPB1P04440 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPB1P04440 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DPB1P04440 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 ECEL1P2-201ENST00000461596 1295 ntBASIC20.85■□□□□ 0.93
HLA-DPB1P04440 SMPD5-203ENST00000639008 1464 ntBASIC20.85■□□□□ 0.93
HLA-DPB1P04440 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 AC004812.2-201ENST00000611079 2094 ntBASIC20.85■□□□□ 0.93
HLA-DPB1P04440 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPB1P04440 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.84■□□□□ 0.93
HLA-DPB1P04440 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DPB1P04440 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DPB1P04440 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.83■□□□□ 0.93
HLA-DPB1P04440 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DPB1P04440 HSD17B1P1-201ENST00000590052 955 ntBASIC20.83■□□□□ 0.93
HLA-DPB1P04440 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DPB1P04440 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DPB1P04440 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DPB1P04440 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPB1P04440 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 AC025884.2-201ENST00000553429 711 ntBASIC20.81■□□□□ 0.92
HLA-DPB1P04440 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPB1P04440 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HLA-DPB1P04440 RNF126P1-201ENST00000567452 1320 ntBASIC20.79■□□□□ 0.92
HLA-DPB1P04440 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DPB1P04440 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DPB1P04440 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
HLA-DPB1P04440 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.77■□□□□ 0.91
HLA-DPB1P04440 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms