Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV3P03979 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.31■□□□□ 0.52
TRGV3P03979 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV3P03979 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRGV3P03979 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.31■□□□□ 0.52
TRGV3P03979 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.31■□□□□ 0.52
TRGV3P03979 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV3P03979 AC142381.3-201ENST00000568208 1670 ntBASIC18.31■□□□□ 0.52
TRGV3P03979 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV3P03979 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRGV3P03979 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV3P03979 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV3P03979 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV3P03979 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV3P03979 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV3P03979 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.29■□□□□ 0.52
TRGV3P03979 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.29■□□□□ 0.52
TRGV3P03979 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
TRGV3P03979 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV3P03979 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV3P03979 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV3P03979 AC103834.1-201ENST00000520383 144 ntBASIC18.29■□□□□ 0.52
TRGV3P03979 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV3P03979 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.29■□□□□ 0.52
TRGV3P03979 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV3P03979 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
TRGV3P03979 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV3P03979 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.28■□□□□ 0.52
TRGV3P03979 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TRGV3P03979 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV3P03979 THA1P-201ENST00000590384 1145 ntBASIC18.28■□□□□ 0.52
TRGV3P03979 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.28■□□□□ 0.52
TRGV3P03979 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.28■□□□□ 0.52
TRGV3P03979 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV3P03979 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
TRGV3P03979 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV3P03979 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV3P03979 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV3P03979 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV3P03979 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.27■□□□□ 0.52
TRGV3P03979 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.27■□□□□ 0.52
TRGV3P03979 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
TRGV3P03979 RARRES2P1-201ENST00000474487 481 ntBASIC18.27■□□□□ 0.52
TRGV3P03979 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRGV3P03979 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.27■□□□□ 0.51
TRGV3P03979 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.27■□□□□ 0.51
TRGV3P03979 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.26■□□□□ 0.51
TRGV3P03979 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 AC090877.2-201ENST00000558441 1738 ntBASIC18.26■□□□□ 0.51
TRGV3P03979 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRGV3P03979 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 AC011551.1-201ENST00000614101 683 ntBASIC18.26■□□□□ 0.51
TRGV3P03979 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV3P03979 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRGV3P03979 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRGV3P03979 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.25■□□□□ 0.51
TRGV3P03979 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.25■□□□□ 0.51
TRGV3P03979 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.25■□□□□ 0.51
TRGV3P03979 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.25■□□□□ 0.51
TRGV3P03979 AC120024.1-201ENST00000562672 995 ntBASIC18.25■□□□□ 0.51
TRGV3P03979 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.25■□□□□ 0.51
TRGV3P03979 MIR6089-201ENST00000616698 64 ntBASIC18.25■□□□□ 0.51
TRGV3P03979 AC138932.3-201ENST00000567634 1902 ntBASIC18.25■□□□□ 0.51
TRGV3P03979 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.25■□□□□ 0.51
TRGV3P03979 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.25■□□□□ 0.51
TRGV3P03979 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV3P03979 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV3P03979 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV3P03979 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV3P03979 KRT18P24-201ENST00000344739 1156 ntBASIC18.24■□□□□ 0.51
TRGV3P03979 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.24■□□□□ 0.51
TRGV3P03979 AC103724.3-201ENST00000564481 992 ntBASIC18.24■□□□□ 0.51
TRGV3P03979 AL031848.2-201ENST00000607670 837 ntBASIC18.24■□□□□ 0.51
TRGV3P03979 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRGV3P03979 AP003733.4-201ENST00000623785 1697 ntBASIC18.24■□□□□ 0.51
TRGV3P03979 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV3P03979 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.23■□□□□ 0.51
TRGV3P03979 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRGV3P03979 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV3P03979 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
TRGV3P03979 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRGV3P03979 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV3P03979 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.23■□□□□ 0.51
TRGV3P03979 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV3P03979 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRGV3P03979 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV3P03979 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV3P03979 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV3P03979 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.22■□□□□ 0.51
TRGV3P03979 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV3P03979 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV3P03979 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRGV3P03979 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms