Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA2P01906 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HLA-DQA2P01906 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HLA-DQA2P01906 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA2P01906 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA2P01906 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DQA2P01906 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQA2P01906 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQA2P01906 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DQA2P01906 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.83■□□□□ 0.92
HLA-DQA2P01906 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 FOXO3B-201ENST00000395675 1928 ntBASIC20.82■□□□□ 0.92
HLA-DQA2P01906 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DQA2P01906 LINC00543-201ENST00000567234 1845 ntBASIC20.81■□□□□ 0.92
HLA-DQA2P01906 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA2P01906 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 MIR6089-201ENST00000616698 64 ntBASIC20.8■□□□□ 0.92
HLA-DQA2P01906 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DQA2P01906 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQA2P01906 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA2P01906 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 AC141586.4-201ENST00000624558 1573 ntBASIC20.77■□□□□ 0.92
HLA-DQA2P01906 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA2P01906 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HLA-DQA2P01906 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HLA-DQA2P01906 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 AC018755.3-202ENST00000596210 929 ntBASIC20.76■□□□□ 0.91
HLA-DQA2P01906 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DQA2P01906 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DQA2P01906 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HLA-DQA2P01906 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DQA2P01906 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQA2P01906 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQA2P01906 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQA2P01906 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DQA2P01906 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DQA2P01906 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DQA2P01906 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DQA2P01906 AL592293.1-201ENST00000502889 1188 ntBASIC20.73■□□□□ 0.91
HLA-DQA2P01906 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DQA2P01906 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
HLA-DQA2P01906 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms