Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NDUFS3O75489 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.25■■□□□ 1.31
NDUFS3O75489 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NDUFS3O75489 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NDUFS3O75489 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS3O75489 TSPY13P-201ENST00000338964 914 ntBASIC23.24■■□□□ 1.31
NDUFS3O75489 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS3O75489 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NDUFS3O75489 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NDUFS3O75489 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NDUFS3O75489 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.23■■□□□ 1.31
NDUFS3O75489 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.23■■□□□ 1.31
NDUFS3O75489 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NDUFS3O75489 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.23■■□□□ 1.31
NDUFS3O75489 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
NDUFS3O75489 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NDUFS3O75489 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NDUFS3O75489 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
NDUFS3O75489 AC012354.3-201ENST00000623734 483 ntBASIC23.22■■□□□ 1.31
NDUFS3O75489 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NDUFS3O75489 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NDUFS3O75489 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
NDUFS3O75489 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NDUFS3O75489 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NDUFS3O75489 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.21■■□□□ 1.31
NDUFS3O75489 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.21■■□□□ 1.31
NDUFS3O75489 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.21■■□□□ 1.31
NDUFS3O75489 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
NDUFS3O75489 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NDUFS3O75489 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NDUFS3O75489 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.2■■□□□ 1.3
NDUFS3O75489 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NDUFS3O75489 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.2■■□□□ 1.3
NDUFS3O75489 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.2■■□□□ 1.3
NDUFS3O75489 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS3O75489 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.19■■□□□ 1.3
NDUFS3O75489 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.19■■□□□ 1.3
NDUFS3O75489 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
NDUFS3O75489 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFS3O75489 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFS3O75489 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFS3O75489 AC019171.1-201ENST00000601251 1056 ntBASIC23.18■■□□□ 1.3
NDUFS3O75489 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFS3O75489 AC090877.2-201ENST00000558441 1738 ntBASIC23.18■■□□□ 1.3
NDUFS3O75489 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFS3O75489 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.18■■□□□ 1.3
NDUFS3O75489 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS3O75489 HLA-L-211ENST00000482052 1765 ntBASIC23.17■■□□□ 1.3
NDUFS3O75489 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS3O75489 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS3O75489 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS3O75489 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.17■■□□□ 1.3
NDUFS3O75489 AC074183.2-201ENST00000623112 922 ntBASIC23.17■■□□□ 1.3
NDUFS3O75489 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NDUFS3O75489 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.17■■□□□ 1.3
NDUFS3O75489 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.16■■□□□ 1.3
NDUFS3O75489 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFS3O75489 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NDUFS3O75489 LINC00543-201ENST00000567234 1845 ntBASIC23.16■■□□□ 1.3
NDUFS3O75489 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFS3O75489 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.16■■□□□ 1.3
NDUFS3O75489 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFS3O75489 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFS3O75489 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NDUFS3O75489 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS3O75489 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.15■■□□□ 1.3
NDUFS3O75489 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS3O75489 AL033527.3-201ENST00000566366 1196 ntBASIC23.15■■□□□ 1.3
NDUFS3O75489 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.15■■□□□ 1.3
NDUFS3O75489 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS3O75489 AC141586.4-201ENST00000624558 1573 ntBASIC23.14■■□□□ 1.3
NDUFS3O75489 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NDUFS3O75489 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
NDUFS3O75489 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
NDUFS3O75489 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDUFS3O75489 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
NDUFS3O75489 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NDUFS3O75489 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
NDUFS3O75489 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDUFS3O75489 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS3O75489 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS3O75489 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS3O75489 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS3O75489 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.13■■□□□ 1.29
NDUFS3O75489 AC022616.5-201ENST00000518796 181 ntBASIC23.13■■□□□ 1.29
NDUFS3O75489 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.13■■□□□ 1.29
NDUFS3O75489 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.13■■□□□ 1.29
NDUFS3O75489 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.13■■□□□ 1.29
NDUFS3O75489 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS3O75489 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.12■■□□□ 1.29
NDUFS3O75489 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.12■■□□□ 1.29
NDUFS3O75489 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
NDUFS3O75489 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms