Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.21■□□□□ 0.83
XRCC2O43543 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XRCC2O43543 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
XRCC2O43543 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRCC2O43543 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.21■□□□□ 0.83
XRCC2O43543 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRCC2O43543 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRCC2O43543 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
XRCC2O43543 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XRCC2O43543 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.2■□□□□ 0.83
XRCC2O43543 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
XRCC2O43543 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRCC2O43543 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XRCC2O43543 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRCC2O43543 LONRF2P2-201ENST00000439212 571 ntBASIC20.2■□□□□ 0.82
XRCC2O43543 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XRCC2O43543 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.2■□□□□ 0.82
XRCC2O43543 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.2■□□□□ 0.82
XRCC2O43543 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
XRCC2O43543 LINC00543-201ENST00000567234 1845 ntBASIC20.2■□□□□ 0.82
XRCC2O43543 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
XRCC2O43543 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
XRCC2O43543 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRCC2O43543 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRCC2O43543 AC139795.1-202ENST00000500444 432 ntBASIC20.19■□□□□ 0.82
XRCC2O43543 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRCC2O43543 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.19■□□□□ 0.82
XRCC2O43543 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.19■□□□□ 0.82
XRCC2O43543 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
XRCC2O43543 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.19■□□□□ 0.82
XRCC2O43543 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
XRCC2O43543 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XRCC2O43543 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
XRCC2O43543 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
XRCC2O43543 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XRCC2O43543 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XRCC2O43543 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XRCC2O43543 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
XRCC2O43543 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XRCC2O43543 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
XRCC2O43543 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XRCC2O43543 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XRCC2O43543 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XRCC2O43543 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.17■□□□□ 0.82
XRCC2O43543 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XRCC2O43543 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
XRCC2O43543 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
XRCC2O43543 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XRCC2O43543 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.16■□□□□ 0.82
XRCC2O43543 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XRCC2O43543 DUX4L18-201ENST00000553347 1267 ntBASIC20.16■□□□□ 0.82
XRCC2O43543 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.16■□□□□ 0.82
XRCC2O43543 AC090877.2-201ENST00000558441 1738 ntBASIC20.16■□□□□ 0.82
XRCC2O43543 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XRCC2O43543 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XRCC2O43543 AC019171.1-201ENST00000601251 1056 ntBASIC20.15■□□□□ 0.82
XRCC2O43543 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
XRCC2O43543 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.15■□□□□ 0.82
XRCC2O43543 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
XRCC2O43543 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
XRCC2O43543 HLA-L-211ENST00000482052 1765 ntBASIC20.14■□□□□ 0.81
XRCC2O43543 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.14■□□□□ 0.81
XRCC2O43543 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XRCC2O43543 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.14■□□□□ 0.81
XRCC2O43543 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
XRCC2O43543 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
XRCC2O43543 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XRCC2O43543 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRCC2O43543 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.13■□□□□ 0.81
XRCC2O43543 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.13■□□□□ 0.81
XRCC2O43543 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.13■□□□□ 0.81
XRCC2O43543 ATP5G2P3-201ENST00000429083 425 ntBASIC20.13■□□□□ 0.81
XRCC2O43543 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XRCC2O43543 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XRCC2O43543 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
XRCC2O43543 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRCC2O43543 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
XRCC2O43543 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRCC2O43543 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRCC2O43543 AC004987.1-201ENST00000428627 508 ntBASIC20.12■□□□□ 0.81
XRCC2O43543 AC022616.5-201ENST00000518796 181 ntBASIC20.12■□□□□ 0.81
XRCC2O43543 AC074183.2-201ENST00000623112 922 ntBASIC20.12■□□□□ 0.81
XRCC2O43543 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRCC2O43543 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.12■□□□□ 0.81
XRCC2O43543 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
XRCC2O43543 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
XRCC2O43543 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
XRCC2O43543 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
XRCC2O43543 BHLHE23-202ENST00000612929 1109 ntBASIC20.11■□□□□ 0.81
XRCC2O43543 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRCC2O43543 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
XRCC2O43543 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms