Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PPM1DO15297 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.81■■□□□ 1.24
PPM1DO15297 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PPM1DO15297 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PPM1DO15297 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.81■■□□□ 1.24
PPM1DO15297 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPM1DO15297 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PPM1DO15297 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPM1DO15297 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.8■■□□□ 1.24
PPM1DO15297 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPM1DO15297 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.8■■□□□ 1.24
PPM1DO15297 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.8■■□□□ 1.24
PPM1DO15297 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPM1DO15297 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPM1DO15297 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PPM1DO15297 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.79■■□□□ 1.24
PPM1DO15297 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.79■■□□□ 1.24
PPM1DO15297 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.79■■□□□ 1.24
PPM1DO15297 AF131216.4-201ENST00000638924 1588 ntBASIC22.79■■□□□ 1.24
PPM1DO15297 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PPM1DO15297 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.79■■□□□ 1.24
PPM1DO15297 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.78■■□□□ 1.24
PPM1DO15297 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.78■■□□□ 1.24
PPM1DO15297 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PPM1DO15297 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PPM1DO15297 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPM1DO15297 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPM1DO15297 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PPM1DO15297 AC090877.2-201ENST00000558441 1738 ntBASIC22.77■■□□□ 1.24
PPM1DO15297 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
PPM1DO15297 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.77■■□□□ 1.24
PPM1DO15297 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PPM1DO15297 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
PPM1DO15297 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PPM1DO15297 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PPM1DO15297 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.76■■□□□ 1.23
PPM1DO15297 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PPM1DO15297 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.76■■□□□ 1.23
PPM1DO15297 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.76■■□□□ 1.23
PPM1DO15297 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PPM1DO15297 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPM1DO15297 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PPM1DO15297 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
PPM1DO15297 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
PPM1DO15297 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PPM1DO15297 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPM1DO15297 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.75■■□□□ 1.23
PPM1DO15297 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.75■■□□□ 1.23
PPM1DO15297 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPM1DO15297 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PPM1DO15297 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PPM1DO15297 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
PPM1DO15297 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PPM1DO15297 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.74■■□□□ 1.23
PPM1DO15297 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPM1DO15297 AC010997.5-201ENST00000609182 354 ntBASIC22.73■■□□□ 1.23
PPM1DO15297 AC020928.2-201ENST00000588717 2197 ntBASIC22.73■■□□□ 1.23
PPM1DO15297 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
PPM1DO15297 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.72■■□□□ 1.23
PPM1DO15297 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.72■■□□□ 1.23
PPM1DO15297 AC008406.3-201ENST00000620001 1374 ntBASIC22.72■■□□□ 1.23
PPM1DO15297 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPM1DO15297 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.71■■□□□ 1.23
PPM1DO15297 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPM1DO15297 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.71■■□□□ 1.23
PPM1DO15297 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.71■■□□□ 1.23
PPM1DO15297 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
PPM1DO15297 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPM1DO15297 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.7■■□□□ 1.22
PPM1DO15297 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.7■■□□□ 1.22
PPM1DO15297 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.7■■□□□ 1.22
PPM1DO15297 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.7■■□□□ 1.22
PPM1DO15297 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PPM1DO15297 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPM1DO15297 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.69■■□□□ 1.22
PPM1DO15297 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPM1DO15297 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPM1DO15297 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPM1DO15297 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPM1DO15297 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.69■■□□□ 1.22
PPM1DO15297 MTDHP2-201ENST00000601468 714 ntBASIC22.69■■□□□ 1.22
PPM1DO15297 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.69■■□□□ 1.22
PPM1DO15297 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPM1DO15297 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPM1DO15297 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPM1DO15297 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.68■■□□□ 1.22
PPM1DO15297 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.68■■□□□ 1.22
PPM1DO15297 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPM1DO15297 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPM1DO15297 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.67■■□□□ 1.22
PPM1DO15297 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPM1DO15297 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPM1DO15297 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.67■■□□□ 1.22
PPM1DO15297 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPM1DO15297 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PPM1DO15297 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPM1DO15297 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.66■■□□□ 1.22
PPM1DO15297 MIR6724-1-201ENST00000616420 92 ntBASIC22.66■■□□□ 1.22
PPM1DO15297 MIR6724-2-201ENST00000616483 92 ntBASIC22.66■■□□□ 1.22
PPM1DO15297 MIR6724-4-201ENST00000617390 92 ntBASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms