Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.7■□□□□ 0.58
UPK2O00526 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
UPK2O00526 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK2O00526 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK2O00526 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPK2O00526 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK2O00526 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
UPK2O00526 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UPK2O00526 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK2O00526 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
UPK2O00526 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.67■□□□□ 0.58
UPK2O00526 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK2O00526 RPS2P7-201ENST00000447334 885 ntBASIC18.67■□□□□ 0.58
UPK2O00526 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.67■□□□□ 0.58
UPK2O00526 AC018755.3-202ENST00000596210 929 ntBASIC18.67■□□□□ 0.58
UPK2O00526 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UPK2O00526 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK2O00526 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.67■□□□□ 0.58
UPK2O00526 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK2O00526 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK2O00526 AL592293.1-201ENST00000502889 1188 ntBASIC18.66■□□□□ 0.58
UPK2O00526 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK2O00526 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK2O00526 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UPK2O00526 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
UPK2O00526 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UPK2O00526 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK2O00526 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK2O00526 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK2O00526 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK2O00526 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
UPK2O00526 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK2O00526 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK2O00526 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK2O00526 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK2O00526 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK2O00526 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.64■□□□□ 0.57
UPK2O00526 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK2O00526 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
UPK2O00526 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.64■□□□□ 0.57
UPK2O00526 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK2O00526 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UPK2O00526 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK2O00526 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK2O00526 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK2O00526 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK2O00526 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UPK2O00526 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK2O00526 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UPK2O00526 SPCS2P3-201ENST00000500401 656 ntBASIC18.63■□□□□ 0.57
UPK2O00526 ABCB10P4-201ENST00000566803 2184 ntBASIC18.63■□□□□ 0.57
UPK2O00526 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK2O00526 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK2O00526 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK2O00526 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPK2O00526 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK2O00526 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UPK2O00526 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms