Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
SIRPB1O00241 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SIRPB1O00241 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.64■□□□□ 0.73
SIRPB1O00241 AC087393.1-201ENST00000582896 145 ntBASIC19.64■□□□□ 0.73
SIRPB1O00241 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPB1O00241 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPB1O00241 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPB1O00241 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPB1O00241 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.64■□□□□ 0.73
SIRPB1O00241 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.64■□□□□ 0.73
SIRPB1O00241 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SIRPB1O00241 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SIRPB1O00241 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPB1O00241 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPB1O00241 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPB1O00241 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPB1O00241 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPB1O00241 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.63■□□□□ 0.73
SIRPB1O00241 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPB1O00241 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.62■□□□□ 0.73
SIRPB1O00241 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 NTF6A-201ENST00000591175 560 ntBASIC19.62■□□□□ 0.73
SIRPB1O00241 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.62■□□□□ 0.73
SIRPB1O00241 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SIRPB1O00241 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPB1O00241 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.61■□□□□ 0.73
SIRPB1O00241 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 LINC00543-201ENST00000567234 1845 ntBASIC19.61■□□□□ 0.73
SIRPB1O00241 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SIRPB1O00241 DUX4L18-201ENST00000553347 1267 ntBASIC19.61■□□□□ 0.73
SIRPB1O00241 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.61■□□□□ 0.73
SIRPB1O00241 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.61■□□□□ 0.73
SIRPB1O00241 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPB1O00241 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.6■□□□□ 0.73
SIRPB1O00241 HLA-L-211ENST00000482052 1765 ntBASIC19.6■□□□□ 0.73
SIRPB1O00241 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPB1O00241 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.6■□□□□ 0.73
SIRPB1O00241 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SIRPB1O00241 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPB1O00241 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPB1O00241 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPB1O00241 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.59■□□□□ 0.73
SIRPB1O00241 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
SIRPB1O00241 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SIRPB1O00241 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SIRPB1O00241 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIRPB1O00241 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SIRPB1O00241 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIRPB1O00241 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SIRPB1O00241 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPB1O00241 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.59■□□□□ 0.73
SIRPB1O00241 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIRPB1O00241 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIRPB1O00241 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.58■□□□□ 0.73
SIRPB1O00241 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.58■□□□□ 0.72
SIRPB1O00241 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.58■□□□□ 0.72
SIRPB1O00241 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.58■□□□□ 0.72
SIRPB1O00241 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIRPB1O00241 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.58■□□□□ 0.72
SIRPB1O00241 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.57■□□□□ 0.72
SIRPB1O00241 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPB1O00241 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPB1O00241 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPB1O00241 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.57■□□□□ 0.72
SIRPB1O00241 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SIRPB1O00241 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.57■□□□□ 0.72
SIRPB1O00241 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPB1O00241 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SIRPB1O00241 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPB1O00241 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPB1O00241 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.57■□□□□ 0.72
SIRPB1O00241 AC141586.4-201ENST00000624558 1573 ntBASIC19.57■□□□□ 0.72
SIRPB1O00241 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPB1O00241 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIRPB1O00241 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPB1O00241 AL592295.1-201ENST00000400984 884 ntBASIC19.56■□□□□ 0.72
SIRPB1O00241 AC139795.1-202ENST00000500444 432 ntBASIC19.56■□□□□ 0.72
SIRPB1O00241 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.56■□□□□ 0.72
SIRPB1O00241 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPB1O00241 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPB1O00241 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms