Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR4O00206 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR4O00206 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TLR4O00206 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TLR4O00206 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
TLR4O00206 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
TLR4O00206 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TLR4O00206 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.19■■□□□ 1.3
TLR4O00206 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.19■■□□□ 1.3
TLR4O00206 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TLR4O00206 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.19■■□□□ 1.3
TLR4O00206 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.19■■□□□ 1.3
TLR4O00206 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TLR4O00206 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TLR4O00206 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TLR4O00206 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.18■■□□□ 1.3
TLR4O00206 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.18■■□□□ 1.3
TLR4O00206 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TLR4O00206 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.18■■□□□ 1.3
TLR4O00206 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TLR4O00206 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
TLR4O00206 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TLR4O00206 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TLR4O00206 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TLR4O00206 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.17■■□□□ 1.3
TLR4O00206 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TLR4O00206 AC135731.1-201ENST00000569415 2548 ntBASIC23.16■■□□□ 1.3
TLR4O00206 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TLR4O00206 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.16■■□□□ 1.3
TLR4O00206 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.16■■□□□ 1.3
TLR4O00206 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.16■■□□□ 1.3
TLR4O00206 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TLR4O00206 AC090877.2-201ENST00000558441 1738 ntBASIC23.16■■□□□ 1.3
TLR4O00206 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TLR4O00206 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TLR4O00206 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TLR4O00206 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TLR4O00206 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR4O00206 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.15■■□□□ 1.3
TLR4O00206 AC097639.1-201ENST00000565519 1891 ntBASIC23.14■■□□□ 1.29
TLR4O00206 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TLR4O00206 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.14■■□□□ 1.29
TLR4O00206 MIR935-201ENST00000401179 91 ntBASIC23.14■■□□□ 1.29
TLR4O00206 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TLR4O00206 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.14■■□□□ 1.29
TLR4O00206 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TLR4O00206 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TLR4O00206 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TLR4O00206 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TLR4O00206 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.13■■□□□ 1.29
TLR4O00206 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
TLR4O00206 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TLR4O00206 MIR4466-201ENST00000606121 54 ntBASIC23.13■■□□□ 1.29
TLR4O00206 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.13■■□□□ 1.29
TLR4O00206 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TLR4O00206 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TLR4O00206 AC096887.2-201ENST00000623443 1957 ntBASIC23.12■■□□□ 1.29
TLR4O00206 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.12■■□□□ 1.29
TLR4O00206 ERN1-208ENST00000606895 2068 ntBASIC23.12■■□□□ 1.29
TLR4O00206 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TLR4O00206 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TLR4O00206 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TLR4O00206 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.11■■□□□ 1.29
TLR4O00206 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.11■■□□□ 1.29
TLR4O00206 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TLR4O00206 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TLR4O00206 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TLR4O00206 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TLR4O00206 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.1■■□□□ 1.29
TLR4O00206 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.1■■□□□ 1.29
TLR4O00206 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TLR4O00206 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.1■■□□□ 1.29
TLR4O00206 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.09■■□□□ 1.29
TLR4O00206 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TLR4O00206 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.09■■□□□ 1.29
TLR4O00206 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TLR4O00206 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.09■■□□□ 1.29
TLR4O00206 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TLR4O00206 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.08■■□□□ 1.29
TLR4O00206 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.08■■□□□ 1.29
TLR4O00206 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TLR4O00206 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TLR4O00206 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TLR4O00206 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TLR4O00206 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.08■■□□□ 1.29
TLR4O00206 AL512631.2-201ENST00000604634 923 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms