Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR4A6H8M9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR4A6H8M9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDHR4A6H8M9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR4A6H8M9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.44■■□□□ 1.02
CDHR4A6H8M9 NTF6A-201ENST00000591175 560 ntBASIC21.44■■□□□ 1.02
CDHR4A6H8M9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR4A6H8M9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CDHR4A6H8M9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR4A6H8M9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDHR4A6H8M9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDHR4A6H8M9 AL592295.1-201ENST00000400984 884 ntBASIC21.42■■□□□ 1.02
CDHR4A6H8M9 LONRF2P2-201ENST00000439212 571 ntBASIC21.42■■□□□ 1.02
CDHR4A6H8M9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
CDHR4A6H8M9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDHR4A6H8M9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDHR4A6H8M9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR4A6H8M9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR4A6H8M9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR4A6H8M9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR4A6H8M9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR4A6H8M9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDHR4A6H8M9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.4■■□□□ 1.02
CDHR4A6H8M9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR4A6H8M9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR4A6H8M9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR4A6H8M9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR4A6H8M9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR4A6H8M9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDHR4A6H8M9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDHR4A6H8M9 AC090877.2-201ENST00000558441 1738 ntBASIC21.39■■□□□ 1.01
CDHR4A6H8M9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR4A6H8M9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR4A6H8M9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR4A6H8M9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.39■■□□□ 1.01
CDHR4A6H8M9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR4A6H8M9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 AC004812.2-201ENST00000611079 2094 ntBASIC21.38■■□□□ 1.01
CDHR4A6H8M9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR4A6H8M9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.37■■□□□ 1.01
CDHR4A6H8M9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR4A6H8M9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR4A6H8M9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR4A6H8M9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR4A6H8M9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR4A6H8M9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR4A6H8M9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDHR4A6H8M9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.34■■□□□ 1.01
CDHR4A6H8M9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms