Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-3A0A0B4J271 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 AL592293.1-201ENST00000502889 1188 ntBASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 AC018755.3-202ENST00000596210 929 ntBASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 MIR6089-201ENST00000616698 64 ntBASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV12-3A0A0B4J271 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 LINC00543-201ENST00000567234 1845 ntBASIC17.24■□□□□ 0.35
TRAV12-3A0A0B4J271 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-3A0A0B4J271 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-3A0A0B4J271 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 RARRES2P2-201ENST00000394842 485 ntBASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-3A0A0B4J271 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.21■□□□□ 0.34
TRAV12-3A0A0B4J271 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 HSD17B1P1-201ENST00000590052 955 ntBASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV12-3A0A0B4J271 AC141586.4-201ENST00000624558 1573 ntBASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 RPS2P7-201ENST00000447334 885 ntBASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-3A0A0B4J271 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 SPCS2P3-201ENST00000500401 656 ntBASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms