Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 AL359258.2-201ENST00000564063 1566 ntBASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV16A0A0A6YYK6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV16A0A0A6YYK6 AC096887.2-201ENST00000623443 1957 ntBASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 AP003733.4-201ENST00000623785 1697 ntBASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV16A0A0A6YYK6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV16A0A0A6YYK6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV16A0A0A6YYK6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV16A0A0A6YYK6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV16A0A0A6YYK6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV16A0A0A6YYK6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 AC022413.1-201ENST00000624602 984 ntBASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV16A0A0A6YYK6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 AL117328.2-201ENST00000624617 1940 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms