Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.27■■□□□ 1
TNFSF12-TNFSF13A0A0A6YY99 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.27■■□□□ 1
TNFSF12-TNFSF13A0A0A6YY99 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.27■■□□□ 1
TNFSF12-TNFSF13A0A0A6YY99 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AC009299.2-201ENST00000482477 511 ntBASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.25■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AC090877.2-201ENST00000558441 1738 ntBASIC21.24■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AL031848.2-201ENST00000607670 837 ntBASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 AC011551.1-201ENST00000614101 683 ntBASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF12-TNFSF13A0A0A6YY99 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.19■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 KRT18P24-201ENST00000344739 1156 ntBASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 AC120024.1-201ENST00000562672 995 ntBASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.15■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFSF12-TNFSF13A0A0A6YY99 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms