Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 AL645728.1-201ENST00000366221 2101 ntBASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 AL589987.1-201ENST00000453380 819 ntBASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 WFDC1-204ENST00000613603 549 ntBASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE5Q9HCH3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 MEP1AP4-201ENST00000423244 1087 ntBASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 SERBP1P3-201ENST00000459980 809 ntBASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE5Q9HCH3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms