Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 AC005089.1-201ENST00000619486 2241 ntBASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 SPDYE17-201ENST00000412399 783 ntBASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 RFPL4AP1-201ENST00000530883 850 ntBASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL1Q6NVV3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 AL691432.1-201ENST00000596308 1422 ntBASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 FO393414.2-201ENST00000405153 598 ntBASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 AC073592.8-201ENST00000624126 511 ntBASIC15.27■□□□□ 0.04
NIPAL1Q6NVV3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 AL596087.1-201ENST00000400979 1969 ntBASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL1Q6NVV3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 FO538757.1-201ENST00000623083 1397 ntBASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.26■□□□□ 0.03
NIPAL1Q6NVV3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms