Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH4P55283 WASH4P-201ENST00000564273 1246 ntBASIC16.05■□□□□ 0.16
CDH4P55283 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH4P55283 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH4P55283 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH4P55283 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDH4P55283 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH4P55283 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH4P55283 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH4P55283 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH4P55283 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH4P55283 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH4P55283 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CDH4P55283 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDH4P55283 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH4P55283 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 AL442647.2-201ENST00000429864 857 ntBASIC16.04■□□□□ 0.16
CDH4P55283 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.04■□□□□ 0.16
CDH4P55283 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH4P55283 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 RN7SL692P-201ENST00000464677 288 ntBASIC16.04■□□□□ 0.16
CDH4P55283 RPL13AP25-201ENST00000484130 612 ntBASIC16.04■□□□□ 0.16
CDH4P55283 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.04■□□□□ 0.16
CDH4P55283 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH4P55283 AL596325.1-201ENST00000563991 1082 ntBASIC16.04■□□□□ 0.16
CDH4P55283 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH4P55283 BRI3BPP1-201ENST00000594224 787 ntBASIC16.04■□□□□ 0.16
CDH4P55283 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH4P55283 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH4P55283 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH4P55283 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDH4P55283 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH4P55283 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH4P55283 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH4P55283 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDH4P55283 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CDH4P55283 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH4P55283 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH4P55283 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH4P55283 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH4P55283 CTBP2P3-201ENST00000585629 1255 ntBASIC16.03■□□□□ 0.16
CDH4P55283 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH4P55283 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
CDH4P55283 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CDH4P55283 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH4P55283 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.03■□□□□ 0.16
CDH4P55283 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH4P55283 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH4P55283 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms