Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP13P45452 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP13P45452 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP13P45452 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP13P45452 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP13P45452 AL512356.2-201ENST00000546955 174 ntBASIC16.43■□□□□ 0.22
MMP13P45452 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP13P45452 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP13P45452 AC026979.3-201ENST00000607315 403 ntBASIC16.43■□□□□ 0.22
MMP13P45452 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP13P45452 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP13P45452 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
MMP13P45452 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP13P45452 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP13P45452 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 AC105250.1-201ENST00000509378 2057 ntBASIC16.42■□□□□ 0.22
MMP13P45452 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 AP001282.1-201ENST00000531301 1499 ntBASIC16.42■□□□□ 0.22
MMP13P45452 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP13P45452 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MMP13P45452 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.42■□□□□ 0.22
MMP13P45452 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP13P45452 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP13P45452 AL139010.1-201ENST00000454878 894 ntBASIC16.42■□□□□ 0.22
MMP13P45452 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 AC004449.1-201ENST00000564240 433 ntBASIC16.42■□□□□ 0.22
MMP13P45452 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP13P45452 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP13P45452 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP13P45452 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MMP13P45452 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MMP13P45452 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 AC091951.1-201ENST00000512854 2465 ntBASIC16.42■□□□□ 0.22
MMP13P45452 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP13P45452 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP13P45452 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP13P45452 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
MMP13P45452 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MMP13P45452 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP13P45452 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 AC011477.6-201ENST00000604980 1927 ntBASIC16.41■□□□□ 0.22
MMP13P45452 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP13P45452 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 AC112693.3-201ENST00000624819 1983 ntBASIC16.41■□□□□ 0.22
MMP13P45452 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP13P45452 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MMP13P45452 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP13P45452 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP13P45452 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP13P45452 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms