Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX2-1P43699 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX2-1P43699 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NKX2-1P43699 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 SCARNA2-201ENST00000458748 420 ntBASIC12.98□□□□□ -0.33
NKX2-1P43699 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX2-1P43699 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.98□□□□□ -0.33
NKX2-1P43699 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.98□□□□□ -0.33
NKX2-1P43699 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 AJ011931.1-201ENST00000618749 2492 ntBASIC12.98□□□□□ -0.33
NKX2-1P43699 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-1P43699 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-1P43699 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 AC104581.4-201ENST00000623126 3052 ntBASIC12.97□□□□□ -0.33
NKX2-1P43699 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 AC127383.1-201ENST00000444697 1800 ntBASIC12.97□□□□□ -0.33
NKX2-1P43699 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.97□□□□□ -0.33
NKX2-1P43699 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.97□□□□□ -0.33
NKX2-1P43699 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.97□□□□□ -0.33
NKX2-1P43699 MIR3652-201ENST00000579335 131 ntBASIC12.97□□□□□ -0.33
NKX2-1P43699 AL732292.2-201ENST00000609649 430 ntBASIC12.97□□□□□ -0.33
NKX2-1P43699 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NKX2-1P43699 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-1P43699 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
NKX2-1P43699 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-1P43699 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NKX2-1P43699 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-1P43699 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-1P43699 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 AC023024.2-201ENST00000623561 1993 ntBASIC12.96□□□□□ -0.33
NKX2-1P43699 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms