Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
SFTPBP07988 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.8□□□□□ -0.2
SFTPBP07988 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SFTPBP07988 AC006058.4-201ENST00000624016 1670 ntBASIC13.8□□□□□ -0.2
SFTPBP07988 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.8□□□□□ -0.2
SFTPBP07988 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SFTPBP07988 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SFTPBP07988 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SFTPBP07988 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.8□□□□□ -0.2
SFTPBP07988 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.8□□□□□ -0.2
SFTPBP07988 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.8□□□□□ -0.2
SFTPBP07988 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 AC002056.1-201ENST00000395613 760 ntBASIC13.79□□□□□ -0.2
SFTPBP07988 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 HAUS4P1-201ENST00000406739 1145 ntBASIC13.79□□□□□ -0.2
SFTPBP07988 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
SFTPBP07988 CNN2P11-201ENST00000429351 262 ntBASIC13.79□□□□□ -0.2
SFTPBP07988 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.79□□□□□ -0.2
SFTPBP07988 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.79□□□□□ -0.2
SFTPBP07988 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.79□□□□□ -0.2
SFTPBP07988 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.79□□□□□ -0.2
SFTPBP07988 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 AL589702.1-201ENST00000641229 1509 ntBASIC13.79□□□□□ -0.2
SFTPBP07988 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SFTPBP07988 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTPBP07988 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTPBP07988 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms