Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH16O75309 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH16O75309 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH16O75309 AC139749.1-202ENST00000617529 3139 ntBASIC16■□□□□ 0.15
CDH16O75309 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16■□□□□ 0.15
CDH16O75309 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16■□□□□ 0.15
CDH16O75309 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH16O75309 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH16O75309 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH16O75309 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16■□□□□ 0.15
CDH16O75309 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDH16O75309 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16■□□□□ 0.15
CDH16O75309 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16■□□□□ 0.15
CDH16O75309 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16■□□□□ 0.15
CDH16O75309 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDH16O75309 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDH16O75309 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH16O75309 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH16O75309 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH16O75309 AC018712.1-201ENST00000455767 687 ntBASIC15.99■□□□□ 0.15
CDH16O75309 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.99■□□□□ 0.15
CDH16O75309 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH16O75309 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH16O75309 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH16O75309 AL121894.2-201ENST00000602977 491 ntBASIC15.99■□□□□ 0.15
CDH16O75309 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDH16O75309 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH16O75309 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH16O75309 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CDH16O75309 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CDH16O75309 IGLL3P-201ENST00000412472 434 ntBASIC15.98■□□□□ 0.15
CDH16O75309 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 AC140658.5-201ENST00000438532 169 ntBASIC15.98■□□□□ 0.15
CDH16O75309 HNRNPDP1-201ENST00000439535 754 ntBASIC15.98■□□□□ 0.15
CDH16O75309 VN2R19P-201ENST00000442399 1052 ntBASIC15.98■□□□□ 0.15
CDH16O75309 AC108751.1-201ENST00000490852 363 ntBASIC15.98■□□□□ 0.15
CDH16O75309 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.98■□□□□ 0.15
CDH16O75309 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH16O75309 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.98■□□□□ 0.15
CDH16O75309 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH16O75309 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH16O75309 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms