Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 PKD1P5-201ENST00000532415 10291 ntBASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 KRT16P4-201ENST00000453883 522 ntBASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AC104819.1-201ENST00000504587 486 ntBASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AC012615.1-201ENST00000565797 1299 ntBASIC11.11□□□□□ -0.63
LINC01546A6NGU7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01546A6NGU7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 CICP11-201ENST00000434745 2827 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AC099521.3-201ENST00000624251 2938 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AC005521.1-201ENST00000393351 872 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms