Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 U82695.1-201ENST00000635752 1889 ntBASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 WASH6P-202ENST00000359512 1437 ntBASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 POLD2P1-201ENST00000511220 997 ntBASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AP002472.1-201ENST00000577490 586 ntBASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AL078644.1-201ENST00000609881 752 ntBASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AC041040.2-201ENST00000622926 2899 ntBASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HHLA3Q9XRX5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AC013726.1-201ENST00000563747 2285 ntBASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AC092919.2-201ENST00000623631 1645 ntBASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms