Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 MROH4P-201ENST00000431302 1578 ntBASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AC087388.1-201ENST00000571370 1112 ntBASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AL732292.2-201ENST00000609649 430 ntBASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 C18orf15-201ENST00000623680 2534 ntBASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 AC006504.4-201ENST00000592118 1568 ntBASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.65□□□□□ -0.71
SND1-IT1Q9HBX3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AGAP7P-201ENST00000582299 2062 ntBASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AGAP14-201ENST00000624701 2060 ntBASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AC006557.2-201ENST00000592985 1240 ntBASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AP000550.4-202ENST00000639755 178 ntBASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms