Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 AC021087.4-201ENST00000563761 564 ntBASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 AC008608.2-201ENST00000606089 416 ntBASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 AL078644.1-201ENST00000609881 752 ntBASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 AL928921.2-201ENST00000641325 2442 ntBASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKAP2Q8WWK9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 AC010327.5-201ENST00000586923 3061 ntBASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 MRPL20P1-201ENST00000400819 433 ntBASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 SCARNA2-201ENST00000458748 420 ntBASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKAP2Q8WWK9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms