Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC241585.1-201ENST00000433527 519 ntBASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC025048.3-201ENST00000590609 569 ntBASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC005702.4-201ENST00000618393 416 ntBASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC046158.3-201ENST00000624947 2558 ntBASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AC087499.5-201ENST00000452760 1342 ntBASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AC055876.3-201ENST00000431496 288 ntBASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AC138649.4-201ENST00000612222 287 ntBASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AL590560.3-201ENST00000623350 461 ntBASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF2Q8N5M1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 AC127383.1-201ENST00000444697 1800 ntBASIC16.17■□□□□ 0.18
ATPAF2Q8N5M1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms