Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 YRDCP1-201ENST00000621419 643 ntBASIC18.79■□□□□ 0.6
SLX4Q8IY92 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 AC022211.2-201ENST00000585075 2527 ntBASIC18.79■□□□□ 0.6
SLX4Q8IY92 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 AL358472.3-201ENST00000608147 415 ntBASIC18.79■□□□□ 0.6
SLX4Q8IY92 AC138466.3-201ENST00000619983 221 ntBASIC18.79■□□□□ 0.6
SLX4Q8IY92 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLX4Q8IY92 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.79■□□□□ 0.6
SLX4Q8IY92 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 AC005324.6-201ENST00000587972 613 ntBASIC18.78■□□□□ 0.6
SLX4Q8IY92 AL353726.2-201ENST00000623259 884 ntBASIC18.78■□□□□ 0.6
SLX4Q8IY92 AL805961.1-203ENST00000641078 1258 ntBASIC18.78■□□□□ 0.6
SLX4Q8IY92 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLX4Q8IY92 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLX4Q8IY92 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 AGGF1P2-201ENST00000426656 2106 ntBASIC18.77■□□□□ 0.6
SLX4Q8IY92 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLX4Q8IY92 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
SLX4Q8IY92 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms