Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AL136379.1-201ENST00000623471 2642 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC092127.1-201ENST00000567093 3455 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 FAM220BP-201ENST00000377689 816 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC084121.4-201ENST00000641598 221 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AF228730.8-201ENST00000642140 221 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AP3S2-216ENST00000617003 1561 ntBASIC14.43□□□□□ -0.1
NIPAL3Q6P499 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 ALG1L8P-201ENST00000533887 760 ntBASIC14.42□□□□□ -0.1
NIPAL3Q6P499 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 AC009093.7-201ENST00000623853 1223 ntBASIC14.42□□□□□ -0.1
NIPAL3Q6P499 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NIPAL3Q6P499 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms