Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 AL356488.2-201ENST00000602755 427 ntBASIC14.21□□□□□ -0.13
CCDC58Q4VC31 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 AC008735.5-201ENST00000623544 497 ntBASIC14.21□□□□□ -0.13
CCDC58Q4VC31 AC005593.1-201ENST00000624894 515 ntBASIC14.21□□□□□ -0.13
CCDC58Q4VC31 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC58Q4VC31 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC58Q4VC31 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 AC027601.5-201ENST00000624065 2482 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 RPS2P1-201ENST00000434010 821 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 KRT18P34-201ENST00000488218 1270 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 AC109635.5-201ENST00000533593 962 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 AC093458.2-201ENST00000623150 629 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 CICP17-201ENST00000418553 2377 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC58Q4VC31 Z82170.1-201ENST00000625081 3192 ntBASIC14.2□□□□□ -0.14
CCDC58Q4VC31 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms