Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC27Q2M243 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC27Q2M243 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCDC27Q2M243 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC27Q2M243 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 RN7SL399P-201ENST00000471648 279 ntBASIC20.42■□□□□ 0.86
CCDC27Q2M243 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 AC025181.2-201ENST00000606994 802 ntBASIC20.42■□□□□ 0.86
CCDC27Q2M243 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC27Q2M243 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC27Q2M243 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.41■□□□□ 0.86
CCDC27Q2M243 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 AC236430.1-201ENST00000402231 743 ntBASIC20.41■□□□□ 0.86
CCDC27Q2M243 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 AC055876.2-201ENST00000531834 546 ntBASIC20.41■□□□□ 0.86
CCDC27Q2M243 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 MIR4745-201ENST00000577608 62 ntBASIC20.41■□□□□ 0.86
CCDC27Q2M243 AL662799.1-202ENST00000614205 422 ntBASIC20.41■□□□□ 0.86
CCDC27Q2M243 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC27Q2M243 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC27Q2M243 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 AL391825.1-201ENST00000457671 1364 ntBASIC20.4■□□□□ 0.86
CCDC27Q2M243 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 AL109954.1-202ENST00000564051 2148 ntBASIC20.4■□□□□ 0.86
CCDC27Q2M243 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.4■□□□□ 0.86
CCDC27Q2M243 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms