Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NFX1Q12986 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
NFX1Q12986 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFX1Q12986 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
NFX1Q12986 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
NFX1Q12986 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.33■□□□□ 0.37
NFX1Q12986 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFX1Q12986 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
NFX1Q12986 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
NFX1Q12986 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
NFX1Q12986 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NFX1Q12986 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NFX1Q12986 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFX1Q12986 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.33■□□□□ 0.36
NFX1Q12986 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.33■□□□□ 0.36
NFX1Q12986 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.33■□□□□ 0.36
NFX1Q12986 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 CROCCP4-201ENST00000457096 498 ntBASIC17.33■□□□□ 0.36
NFX1Q12986 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.33■□□□□ 0.36
NFX1Q12986 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.33■□□□□ 0.36
NFX1Q12986 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.33■□□□□ 0.36
NFX1Q12986 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.33■□□□□ 0.36
NFX1Q12986 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.33■□□□□ 0.36
NFX1Q12986 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 AL450472.2-201ENST00000603663 1156 ntBASIC17.33■□□□□ 0.36
NFX1Q12986 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.33■□□□□ 0.36
NFX1Q12986 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.33■□□□□ 0.36
NFX1Q12986 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.33■□□□□ 0.36
NFX1Q12986 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NFX1Q12986 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NFX1Q12986 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NFX1Q12986 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NFX1Q12986 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NFX1Q12986 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
NFX1Q12986 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.32■□□□□ 0.36
NFX1Q12986 AL442647.2-201ENST00000429864 857 ntBASIC17.32■□□□□ 0.36
NFX1Q12986 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.32■□□□□ 0.36
NFX1Q12986 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.32■□□□□ 0.36
NFX1Q12986 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.32■□□□□ 0.36
NFX1Q12986 AL359711.2-201ENST00000563105 872 ntBASIC17.32■□□□□ 0.36
NFX1Q12986 BTNL10-201ENST00000595971 695 ntBASIC17.32■□□□□ 0.36
NFX1Q12986 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 AC007950.2-201ENST00000615045 2347 ntBASIC17.32■□□□□ 0.36
NFX1Q12986 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NFX1Q12986 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
NFX1Q12986 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NFX1Q12986 AC008894.3-201ENST00000624324 3103 ntBASIC17.32■□□□□ 0.36
NFX1Q12986 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.31■□□□□ 0.36
NFX1Q12986 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.31■□□□□ 0.36
NFX1Q12986 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
NFX1Q12986 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NFX1Q12986 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.31■□□□□ 0.36
NFX1Q12986 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 AC006449.6-201ENST00000612330 2296 ntBASIC17.31■□□□□ 0.36
NFX1Q12986 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NFX1Q12986 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.31■□□□□ 0.36
NFX1Q12986 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.31■□□□□ 0.36
NFX1Q12986 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NFX1Q12986 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.31■□□□□ 0.36
NFX1Q12986 AL162726.2-201ENST00000438986 1017 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms