Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
KCNA1Q09470 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.33■□□□□ 0.37
KCNA1Q09470 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNA1Q09470 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KCNA1Q09470 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNA1Q09470 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNA1Q09470 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNA1Q09470 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.33■□□□□ 0.36
KCNA1Q09470 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNA1Q09470 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KCNA1Q09470 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNA1Q09470 AL589987.1-201ENST00000453380 819 ntBASIC17.33■□□□□ 0.36
KCNA1Q09470 SDHAP3-202ENST00000515467 728 ntBASIC17.33■□□□□ 0.36
KCNA1Q09470 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNA1Q09470 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.33■□□□□ 0.36
KCNA1Q09470 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.33■□□□□ 0.36
KCNA1Q09470 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNA1Q09470 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNA1Q09470 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNA1Q09470 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 AC144831.1-201ENST00000573312 2656 ntBASIC17.32■□□□□ 0.36
KCNA1Q09470 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 FAM8A3P-201ENST00000427218 844 ntBASIC17.32■□□□□ 0.36
KCNA1Q09470 AC114501.2-201ENST00000439631 535 ntBASIC17.32■□□□□ 0.36
KCNA1Q09470 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.32■□□□□ 0.36
KCNA1Q09470 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.32■□□□□ 0.36
KCNA1Q09470 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 AC074044.1-201ENST00000609673 707 ntBASIC17.32■□□□□ 0.36
KCNA1Q09470 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNA1Q09470 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNA1Q09470 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KCNA1Q09470 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.32■□□□□ 0.36
KCNA1Q09470 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
KCNA1Q09470 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.31■□□□□ 0.36
KCNA1Q09470 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNA1Q09470 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNA1Q09470 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
KCNA1Q09470 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms