Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 AL109954.1-202ENST00000564051 2148 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 AC006486.2-201ENST00000624246 2199 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 MIR1233-2-201ENST00000408138 82 ntBASIC13.8□□□□□ -0.2
HIST1H3AP68431 MIR1233-1-201ENST00000408722 82 ntBASIC13.8□□□□□ -0.2
HIST1H3AP68431 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 HLA-V-204ENST00000476601 1289 ntBASIC13.8□□□□□ -0.2
HIST1H3AP68431 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 AL033527.5-202ENST00000641632 1098 ntBASIC13.8□□□□□ -0.2
HIST1H3AP68431 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H3AP68431 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H3AP68431 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 Z97205.2-201ENST00000564697 1639 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AC074338.1-201ENST00000416825 156 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 SERBP1P3-201ENST00000459980 809 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms