Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.08□□□□□ -0.32
SNCAP37840 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.08□□□□□ -0.32
SNCAP37840 KRT18P27-201ENST00000427733 1299 ntBASIC13.08□□□□□ -0.32
SNCAP37840 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.08□□□□□ -0.32
SNCAP37840 IGHV3-65-201ENST00000523210 341 ntBASIC13.08□□□□□ -0.32
SNCAP37840 AL356488.2-201ENST00000602755 427 ntBASIC13.08□□□□□ -0.32
SNCAP37840 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.08□□□□□ -0.32
SNCAP37840 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.08□□□□□ -0.32
SNCAP37840 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.08□□□□□ -0.32
SNCAP37840 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SNCAP37840 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.08□□□□□ -0.32
SNCAP37840 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SNCAP37840 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
SNCAP37840 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SNCAP37840 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNCAP37840 AC079781.5-202ENST00000641784 3743 ntBASIC13.08□□□□□ -0.32
SNCAP37840 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SNCAP37840 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
SNCAP37840 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 AKR1C7P-201ENST00000305623 895 ntBASIC13.07□□□□□ -0.32
SNCAP37840 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 AC073621.1-201ENST00000392730 636 ntBASIC13.07□□□□□ -0.32
SNCAP37840 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.07□□□□□ -0.32
SNCAP37840 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 RNPS1P1-201ENST00000507437 918 ntBASIC13.07□□□□□ -0.32
SNCAP37840 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.07□□□□□ -0.32
SNCAP37840 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.07□□□□□ -0.32
SNCAP37840 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 AC105339.3-201ENST00000560043 636 ntBASIC13.07□□□□□ -0.32
SNCAP37840 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.07□□□□□ -0.32
SNCAP37840 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
SNCAP37840 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 AC008735.5-201ENST00000623544 497 ntBASIC13.07□□□□□ -0.32
SNCAP37840 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 AL592424.1-201ENST00000563624 1536 ntBASIC13.07□□□□□ -0.32
SNCAP37840 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.07□□□□□ -0.32
SNCAP37840 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCAP37840 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SNCAP37840 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 AC091951.1-201ENST00000512854 2465 ntBASIC13.06□□□□□ -0.32
SNCAP37840 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.06□□□□□ -0.32
SNCAP37840 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.06□□□□□ -0.32
SNCAP37840 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms