Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.92□□□□□ -0.18
UBCP0CG48 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.92□□□□□ -0.18
UBCP0CG48 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.92□□□□□ -0.18
UBCP0CG48 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.92□□□□□ -0.18
UBCP0CG48 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 BNIP3P1-202ENST00000550043 1585 ntBASIC13.92□□□□□ -0.18
UBCP0CG48 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 AC023908.3-201ENST00000564211 3047 ntBASIC13.91□□□□□ -0.18
UBCP0CG48 AL359258.3-201ENST00000622910 2331 ntBASIC13.91□□□□□ -0.18
UBCP0CG48 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
UBCP0CG48 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UBCP0CG48 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UBCP0CG48 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.91□□□□□ -0.18
UBCP0CG48 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.91□□□□□ -0.18
UBCP0CG48 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 AC007967.2-201ENST00000432613 625 ntBASIC13.91□□□□□ -0.18
UBCP0CG48 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.91□□□□□ -0.18
UBCP0CG48 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.91□□□□□ -0.18
UBCP0CG48 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
UBCP0CG48 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.91□□□□□ -0.18
UBCP0CG48 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.91□□□□□ -0.18
UBCP0CG48 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.91□□□□□ -0.18
UBCP0CG48 AC099522.2-201ENST00000607001 744 ntBASIC13.91□□□□□ -0.18
UBCP0CG48 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UBCP0CG48 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 MYO15B-237ENST00000642007 4893 ntBASIC13.91□□□□□ -0.18
UBCP0CG48 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
UBCP0CG48 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.91□□□□□ -0.18
UBCP0CG48 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UBCP0CG48 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBCP0CG48 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms