Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
NHLRC4P0CG21 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NHLRC4P0CG21 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NHLRC4P0CG21 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.69□□□□□ -0.54
NHLRC4P0CG21 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
NHLRC4P0CG21 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.69□□□□□ -0.54
NHLRC4P0CG21 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AGGF1P2-201ENST00000426656 2106 ntBASIC11.68□□□□□ -0.54
NHLRC4P0CG21 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AC099336.1-201ENST00000417053 1171 ntBASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 TNRC18P2-201ENST00000417666 2714 ntBASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NHLRC4P0CG21 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 SLC25A1P3-201ENST00000395415 828 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AP000812.2-201ENST00000538934 718 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 COG4-212ENST00000564653 590 ntTSL 5 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AC009486.1-201ENST00000569860 813 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 MIR5189-201ENST00000577370 114 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 RN7SL190P-201ENST00000582519 257 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AC010328.2-201ENST00000597698 1111 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AL365330.1-201ENST00000607459 531 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC11.67□□□□□ -0.54
NHLRC4P0CG21 AL139099.5-201ENST00000635274 300 ntBASIC11.67□□□□□ -0.54
NHLRC4P0CG21 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms