Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AC008761.3-201ENST00000624803 892 ntBASIC16.1■□□□□ 0.17
CAPN8A6NHC0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 CDC14C-201ENST00000428251 1719 ntBASIC16.1■□□□□ 0.17
CAPN8A6NHC0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 LINC02447-202ENST00000501888 2146 ntBASIC16.1■□□□□ 0.17
CAPN8A6NHC0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 KRT8P12-202ENST00000472924 1397 ntBASIC16.1■□□□□ 0.17
CAPN8A6NHC0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 RPL37AP1-201ENST00000412502 279 ntBASIC16.09■□□□□ 0.17
CAPN8A6NHC0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AC097493.3-201ENST00000509725 367 ntBASIC16.09■□□□□ 0.17
CAPN8A6NHC0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 TEX28P1-201ENST00000613479 1221 ntBASIC16.09■□□□□ 0.17
CAPN8A6NHC0 TEX28P2-201ENST00000617764 1221 ntBASIC16.09■□□□□ 0.17
CAPN8A6NHC0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AC010491.1-201ENST00000563101 2797 ntBASIC16.09■□□□□ 0.17
CAPN8A6NHC0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN8A6NHC0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN8A6NHC0 AC011477.6-201ENST00000604980 1927 ntBASIC16.08■□□□□ 0.16
CAPN8A6NHC0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 IGHV3-42-201ENST00000520410 361 ntBASIC16.08■□□□□ 0.16
CAPN8A6NHC0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 AL390955.2-201ENST00000603032 514 ntBASIC16.08■□□□□ 0.16
CAPN8A6NHC0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 AC013268.4-201ENST00000637413 2228 ntBASIC16.08■□□□□ 0.16
CAPN8A6NHC0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 KRT8P37-201ENST00000451609 1420 ntBASIC16.08■□□□□ 0.16
CAPN8A6NHC0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN8A6NHC0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms