Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC6Q99741 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC6Q99741 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC6Q99741 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
CDC6Q99741 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 REXO1L8P-201ENST00000604378 1897 ntBASIC15.21■□□□□ 0.03
CDC6Q99741 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC6Q99741 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC6Q99741 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC6Q99741 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC6Q99741 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.21■□□□□ 0.03
CDC6Q99741 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CDC6Q99741 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC6Q99741 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC6Q99741 IGHJ2P-201ENST00000454480 60 ntBASIC15.21■□□□□ 0.03
CDC6Q99741 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC6Q99741 RNA5SP423-201ENST00000517127 109 ntBASIC15.21■□□□□ 0.03
CDC6Q99741 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC6Q99741 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC6Q99741 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 AL450472.2-201ENST00000603663 1156 ntBASIC15.21■□□□□ 0.03
CDC6Q99741 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC6Q99741 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC6Q99741 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 AC022211.2-201ENST00000585075 2527 ntBASIC15.21■□□□□ 0.03
CDC6Q99741 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC6Q99741 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.21■□□□□ 0.02
CDC6Q99741 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CDC6Q99741 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDC6Q99741 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC6Q99741 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.21■□□□□ 0.02
CDC6Q99741 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.2■□□□□ 0.02
CDC6Q99741 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDC6Q99741 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 AHCYP2-201ENST00000430630 1300 ntBASIC15.2■□□□□ 0.02
CDC6Q99741 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC6Q99741 AKR7A2P1-201ENST00000460134 915 ntBASIC15.2■□□□□ 0.02
CDC6Q99741 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC6Q99741 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC6Q99741 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC6Q99741 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms