Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.45■□□□□ 0.06
PRPF18Q99633 AC004877.2-201ENST00000623941 599 ntBASIC15.45■□□□□ 0.06
PRPF18Q99633 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.45■□□□□ 0.06
PRPF18Q99633 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PRPF18Q99633 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PRPF18Q99633 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PRPF18Q99633 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.45■□□□□ 0.06
PRPF18Q99633 LINC00528-201ENST00000600723 2160 ntBASIC15.45■□□□□ 0.06
PRPF18Q99633 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PRPF18Q99633 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.45■□□□□ 0.06
PRPF18Q99633 AC008677.1-201ENST00000519230 1561 ntBASIC15.45■□□□□ 0.06
PRPF18Q99633 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRPF18Q99633 AC016027.1-202ENST00000607927 1699 ntBASIC15.44■□□□□ 0.06
PRPF18Q99633 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.44■□□□□ 0.06
PRPF18Q99633 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 AL122018.1-201ENST00000446607 2310 ntBASIC15.44■□□□□ 0.06
PRPF18Q99633 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.44■□□□□ 0.06
PRPF18Q99633 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.44■□□□□ 0.06
PRPF18Q99633 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PRPF18Q99633 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PRPF18Q99633 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.44■□□□□ 0.06
PRPF18Q99633 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.44■□□□□ 0.06
PRPF18Q99633 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.44■□□□□ 0.06
PRPF18Q99633 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.44■□□□□ 0.06
PRPF18Q99633 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 SLC25A6P4-201ENST00000586535 553 ntBASIC15.44■□□□□ 0.06
PRPF18Q99633 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 AP003680.1-201ENST00000598970 3660 ntBASIC15.44■□□□□ 0.06
PRPF18Q99633 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 AC073439.1-201ENST00000624121 1774 ntBASIC15.44■□□□□ 0.06
PRPF18Q99633 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PRPF18Q99633 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRPF18Q99633 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PRPF18Q99633 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.43■□□□□ 0.06
PRPF18Q99633 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 WASH6P-202ENST00000359512 1437 ntBASIC15.43■□□□□ 0.06
PRPF18Q99633 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.43■□□□□ 0.06
PRPF18Q99633 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 CICP14-201ENST00000629111 2732 ntBASIC15.43■□□□□ 0.06
PRPF18Q99633 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PRPF18Q99633 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.43■□□□□ 0.06
PRPF18Q99633 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.43■□□□□ 0.06
PRPF18Q99633 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PRPF18Q99633 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PRPF18Q99633 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.43■□□□□ 0.06
PRPF18Q99633 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRPF18Q99633 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms