Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 AC015802.1-201ENST00000588104 1449 ntBASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 AL365209.1-201ENST00000624418 6473 ntBASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DYNC2LI1Q8TCX1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 MIR4321-201ENST00000592276 80 ntBASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 AC139887.4-201ENST00000607877 719 ntBASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DYNC2LI1Q8TCX1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DYNC2LI1Q8TCX1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms