Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.01□□□□□ -0.49
MRPL54Q6P161 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.01□□□□□ -0.49
MRPL54Q6P161 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 RET-205ENST00000615310 4337 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12□□□□□ -0.49
MRPL54Q6P161 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 SPDYE21P-201ENST00000413323 827 ntBASIC12□□□□□ -0.49
MRPL54Q6P161 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 SLC25A3P1-201ENST00000443844 931 ntBASIC12□□□□□ -0.49
MRPL54Q6P161 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12□□□□□ -0.49
MRPL54Q6P161 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12□□□□□ -0.49
MRPL54Q6P161 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 MME-217ENST00000616757 1315 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
MRPL54Q6P161 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12□□□□□ -0.49
MRPL54Q6P161 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 SLC22A20-204ENST00000530038 1673 ntBASIC12□□□□□ -0.49
MRPL54Q6P161 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL54Q6P161 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
MRPL54Q6P161 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
MRPL54Q6P161 BEND3P1-201ENST00000421591 1944 ntBASIC11.99□□□□□ -0.49
MRPL54Q6P161 AC011477.6-201ENST00000604980 1927 ntBASIC11.99□□□□□ -0.49
MRPL54Q6P161 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
MRPL54Q6P161 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL54Q6P161 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
MRPL54Q6P161 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.99□□□□□ -0.49
MRPL54Q6P161 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.99□□□□□ -0.49
MRPL54Q6P161 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL54Q6P161 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL54Q6P161 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms