Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL1P22362 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL1P22362 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL1P22362 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 KRT8P12-202ENST00000472924 1397 ntBASIC13.59□□□□□ -0.23
CCL1P22362 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 CICP24-201ENST00000605464 2705 ntBASIC13.59□□□□□ -0.23
CCL1P22362 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCL1P22362 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL1P22362 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 AC013726.1-201ENST00000563747 2285 ntBASIC13.59□□□□□ -0.23
CCL1P22362 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL1P22362 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL1P22362 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL1P22362 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 SPDYE14P-201ENST00000442619 822 ntBASIC13.59□□□□□ -0.23
CCL1P22362 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 AP000344.2-201ENST00000512987 629 ntBASIC13.59□□□□□ -0.23
CCL1P22362 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCL1P22362 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL1P22362 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL1P22362 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.59□□□□□ -0.23
CCL1P22362 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCL1P22362 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL1P22362 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCL1P22362 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL1P22362 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.58□□□□□ -0.23
CCL1P22362 ZBED1P1-201ENST00000502364 1930 ntBASIC13.58□□□□□ -0.23
CCL1P22362 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCL1P22362 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
CCL1P22362 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCL1P22362 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCL1P22362 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCL1P22362 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
CCL1P22362 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.58□□□□□ -0.24
CCL1P22362 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.58□□□□□ -0.24
CCL1P22362 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.58□□□□□ -0.24
CCL1P22362 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.58□□□□□ -0.24
CCL1P22362 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.58□□□□□ -0.24
CCL1P22362 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CCL1P22362 RN7SL828P-201ENST00000607615 303 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms