Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NCK1P16333 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NCK1P16333 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15□□□□□ -0.01
NCK1P16333 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 PMS2P7-201ENST00000506558 1336 ntBASIC15□□□□□ -0.01
NCK1P16333 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NCK1P16333 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15□□□□□ -0.01
NCK1P16333 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NCK1P16333 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15□□□□□ -0.01
NCK1P16333 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15□□□□□ -0.01
NCK1P16333 AC109635.5-201ENST00000533593 962 ntBASIC15□□□□□ -0.01
NCK1P16333 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15□□□□□ -0.01
NCK1P16333 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NCK1P16333 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15□□□□□ -0.01
NCK1P16333 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15□□□□□ -0.01
NCK1P16333 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 AJ011931.1-201ENST00000618749 2492 ntBASIC14.99□□□□□ -0.01
NCK1P16333 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 IGLL3P-201ENST00000412472 434 ntBASIC14.99□□□□□ -0.01
NCK1P16333 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.99□□□□□ -0.01
NCK1P16333 AC092474.2-201ENST00000424288 719 ntBASIC14.99□□□□□ -0.01
NCK1P16333 PRSS29P-201ENST00000440800 595 ntBASIC14.99□□□□□ -0.01
NCK1P16333 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.99□□□□□ -0.01
NCK1P16333 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 AC108751.1-201ENST00000490852 363 ntBASIC14.99□□□□□ -0.01
NCK1P16333 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 AL445228.2-201ENST00000605589 952 ntBASIC14.99□□□□□ -0.01
NCK1P16333 IFNL4P1-201ENST00000607083 540 ntBASIC14.99□□□□□ -0.01
NCK1P16333 AC012313.10-201ENST00000623509 926 ntBASIC14.99□□□□□ -0.01
NCK1P16333 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.99□□□□□ -0.01
NCK1P16333 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.99□□□□□ -0.01
NCK1P16333 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NCK1P16333 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms