Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.94□□□□□ -0.18
UBCP0CG48 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.94□□□□□ -0.18
UBCP0CG48 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 AL691432.1-201ENST00000596308 1422 ntBASIC13.94□□□□□ -0.18
UBCP0CG48 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.94□□□□□ -0.18
UBCP0CG48 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.94□□□□□ -0.18
UBCP0CG48 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 AC005089.1-201ENST00000619486 2241 ntBASIC13.94□□□□□ -0.18
UBCP0CG48 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.94□□□□□ -0.18
UBCP0CG48 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 AC004987.2-201ENST00000395959 1148 ntBASIC13.93□□□□□ -0.18
UBCP0CG48 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.93□□□□□ -0.18
UBCP0CG48 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.93□□□□□ -0.18
UBCP0CG48 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.93□□□□□ -0.18
UBCP0CG48 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.93□□□□□ -0.18
UBCP0CG48 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 AC034105.1-201ENST00000563488 319 ntBASIC13.93□□□□□ -0.18
UBCP0CG48 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UBCP0CG48 AP002472.1-201ENST00000577490 586 ntBASIC13.93□□□□□ -0.18
UBCP0CG48 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.93□□□□□ -0.18
UBCP0CG48 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.93□□□□□ -0.18
UBCP0CG48 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.93□□□□□ -0.18
UBCP0CG48 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBCP0CG48 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
UBCP0CG48 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBCP0CG48 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UBCP0CG48 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
UBCP0CG48 REXO1L1P-202ENST00000608646 1974 ntBASIC13.92□□□□□ -0.18
UBCP0CG48 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 HLA-A-201ENST00000376802 1334 ntBASIC13.92□□□□□ -0.18
UBCP0CG48 AKAP8P1-201ENST00000434743 1349 ntBASIC13.92□□□□□ -0.18
UBCP0CG48 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UBCP0CG48 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBCP0CG48 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.92□□□□□ -0.18
UBCP0CG48 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms