Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.85■□□□□ 0.13
SHOX2O60902 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.85■□□□□ 0.13
SHOX2O60902 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.85■□□□□ 0.13
SHOX2O60902 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHOX2O60902 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.85■□□□□ 0.13
SHOX2O60902 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.85■□□□□ 0.13
SHOX2O60902 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHOX2O60902 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.85■□□□□ 0.13
SHOX2O60902 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.85■□□□□ 0.13
SHOX2O60902 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.85■□□□□ 0.13
SHOX2O60902 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHOX2O60902 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.85■□□□□ 0.13
SHOX2O60902 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHOX2O60902 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.85■□□□□ 0.13
SHOX2O60902 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SHOX2O60902 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHOX2O60902 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHOX2O60902 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 AC015909.5-201ENST00000624336 2266 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.84■□□□□ 0.13
SHOX2O60902 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SHOX2O60902 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 AL136038.3-201ENST00000561909 1096 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.84■□□□□ 0.13
SHOX2O60902 NTF6B-201ENST00000591913 560 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 MIR4321-201ENST00000592276 80 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 AC064862.7-201ENST00000604520 867 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 AL139424.1-201ENST00000607572 797 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.84■□□□□ 0.13
SHOX2O60902 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.84■□□□□ 0.13
SHOX2O60902 AC067930.6-201ENST00000623257 4947 ntBASIC15.84■□□□□ 0.13
SHOX2O60902 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
SHOX2O60902 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHOX2O60902 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.84■□□□□ 0.13
SHOX2O60902 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHOX2O60902 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHOX2O60902 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHOX2O60902 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHOX2O60902 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.83■□□□□ 0.13
SHOX2O60902 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.83■□□□□ 0.13
SHOX2O60902 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
SHOX2O60902 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SHOX2O60902 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHOX2O60902 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SHOX2O60902 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
SHOX2O60902 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SHOX2O60902 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.83■□□□□ 0.12
SHOX2O60902 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 TMPOP1-202ENST00000424642 1267 ntBASIC15.83■□□□□ 0.12
SHOX2O60902 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.83■□□□□ 0.12
SHOX2O60902 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.83■□□□□ 0.12
SHOX2O60902 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.83■□□□□ 0.12
SHOX2O60902 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.83■□□□□ 0.12
SHOX2O60902 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHOX2O60902 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.83■□□□□ 0.12
SHOX2O60902 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms