Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLIC1O00299 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLIC1O00299 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLIC1O00299 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.96□□□□□ -0.01
CLIC1O00299 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLIC1O00299 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CLIC1O00299 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLIC1O00299 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CLIC1O00299 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CLIC1O00299 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.96□□□□□ -0.02
CLIC1O00299 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
CLIC1O00299 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLIC1O00299 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.95□□□□□ -0.02
CLIC1O00299 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLIC1O00299 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 KRT8P37-201ENST00000451609 1420 ntBASIC14.95□□□□□ -0.02
CLIC1O00299 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.95□□□□□ -0.02
CLIC1O00299 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 AL645939.2-201ENST00000427340 991 ntBASIC14.95□□□□□ -0.02
CLIC1O00299 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.95□□□□□ -0.02
CLIC1O00299 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.95□□□□□ -0.02
CLIC1O00299 AL591424.1-201ENST00000442569 1213 ntBASIC14.95□□□□□ -0.02
CLIC1O00299 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 PHKG1P2-201ENST00000457537 863 ntBASIC14.95□□□□□ -0.02
CLIC1O00299 FAM86C2P-203ENST00000528684 1004 ntBASIC14.95□□□□□ -0.02
CLIC1O00299 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.95□□□□□ -0.02
CLIC1O00299 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CLIC1O00299 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.95□□□□□ -0.02
CLIC1O00299 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 AC091812.2-201ENST00000619081 385 ntBASIC14.95□□□□□ -0.02
CLIC1O00299 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.95□□□□□ -0.02
CLIC1O00299 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.95□□□□□ -0.02
CLIC1O00299 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLIC1O00299 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.95□□□□□ -0.02
CLIC1O00299 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CLIC1O00299 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.95□□□□□ -0.02
CLIC1O00299 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLIC1O00299 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.94□□□□□ -0.02
CLIC1O00299 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.94□□□□□ -0.02
CLIC1O00299 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 CYP4F24P-201ENST00000586049 1580 ntBASIC14.94□□□□□ -0.02
CLIC1O00299 AGAP7P-201ENST00000582299 2062 ntBASIC14.94□□□□□ -0.02
CLIC1O00299 AGAP14-201ENST00000624701 2060 ntBASIC14.94□□□□□ -0.02
CLIC1O00299 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.94□□□□□ -0.02
CLIC1O00299 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.94□□□□□ -0.02
CLIC1O00299 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.94□□□□□ -0.02
CLIC1O00299 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.94□□□□□ -0.02
CLIC1O00299 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.94□□□□□ -0.02
CLIC1O00299 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.94□□□□□ -0.02
CLIC1O00299 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.94□□□□□ -0.02
CLIC1O00299 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLIC1O00299 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.94□□□□□ -0.02
CLIC1O00299 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.94□□□□□ -0.02
CLIC1O00299 KRT18P3-201ENST00000451602 1288 ntBASIC14.94□□□□□ -0.02
CLIC1O00299 AL139010.1-201ENST00000454878 894 ntBASIC14.94□□□□□ -0.02
CLIC1O00299 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms